SGN Marker TG86
SGN-M507
Synonyms |
Locus associations |
RFLP details |
Insert size
1200
|
Vector
pUC
|
Cutting Site
SRD/PST1
|
Drug Resistance
AMP
|
Image
TG86 image not available
|
Forward sequence
GGGGGGGTTTACTTTTTCGCCTATTTTTGTTATAAAGAGGACCAAGCCTGTCATGCTCTCGTTGTAATTAAAACTGTATACAAACTGGCA
TGATCTCGTTGTAAATATTGGTGAGGTTTAATCACACAAAAAATGTCTGAGCTTGATTAACACAATTTGTGGCAGGCTGCCCTTGAAAAG GGTAAGAATCCAGAGAACGATGAGGTCTCATCTGCTGAAAATTCAGTTGATGGTCCAGATCAGGTCGAGTCAGTTATGTCCCAGATAAAC AATCTTGCCATATCTGCAAATCCTGTTGTCCCTCCTTCAAATTCAACCGAGTCTTCTGGCATGGGAGATAGTCTGCAGGACATTGACAAA AAGATCCGAGCTCTGAAGAAAAAGGTATGTACTCTTGTGCTTCTAGTTCTCTGATGGTATGCCATCATTCAAGAGCTATCAAGTAAGTTT GATGCATCTTAAAGCATTTTAGAAATACTCAGCTATTTCTACTTTGCGTTGTATGGTCAAAATACTCTCTATT |
Reverse sequence
GGGGGGGTTTACTTTTTCCCTATTTTTGTTATAAAGAGGACCAAGCCTGTCATGCTCTCGTTGTAATTAAAACTGTATACAAACTGGCAT
GATCTCGTTGTAAATATTGGTGAGGTTTAATCACACAAAAAATGTCTGAGCTTGATTAACACAATTTGTGGCAGGCTGCCCTTGAAAAGG GTAAGAATCCAGAGAACGATGAGGTCTCATCTGCTGAAAATTCAGTTGATGGTCCAGATCAGGTCGAGTCAGTTATGTCCCAGATAAACA ATCTTGCCATATCTGCAAATCCTGTTGTCCCTCCTTCAAATTCAACCGAGTCTTCTGGCATGGGAGATAGTCTGCAGGACATTGACAAAA AGATCCGAGCTCTGAAGAAAAAGGTATGTACTCTTGTGCTTCTAGTTCTCTGATGGTATGCCATCATTCAAGAGCTATCAAGTAAGTTTG ATGCATCTTAAAGCATTTTAGAAATACTCAGCTATTTCTACTTTGCGTTGTATGGTCAAAATACTCTCTAT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U145873 | 7.2e-59 | 134 (25.6% of RFLP seq) | + |
SGN-U145874 | 3e-123 | 222 (42.4% of RFLP seq) | + |
SGN-U161668 | 516 (98.7% of RFLP seq) | + | |
SGN-U145873 | 7.2e-59 | 134 (25.7% of RFLP seq) | - |
SGN-U145874 | 3e-123 | 222 (42.6% of RFLP seq) | - |
SGN-U161668 | 515 (98.8% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG86 was used as an overgo probe on plate 3 [well E12]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TCAGTTGATGGTCCAGATCAGGTC
|
B sequence
GGGACATAACTGACTCGACCTGAT
|
AB sequence
TCAGTTGATGGTCCAGATCAGGTCGAGTCA
|
Marker sequence
GGGGGGGTTTACTTTTTCGCCTATTTTTGTTATAAAGAGGACCAAGCCTG
TCATGCTCTCGTTGTAATTAAAACTGTATACAAACTGGCATGATCTCGTT GTAAATATTGGTGAGGTTTAATCACACAAAAAATGTCTGAGCTTGATTAA CACAATTTGTGGCAGGCTGCCCTTGAAAAGGGTAAGAATCCAGAGAACGA TGAGGTCTCATCTGCTGAAAATTCAGTTGATGGTCCAGATCAGGTCGAGT CAGTTATGTCCCAGATAAACAATCTTGCCATATCTGCAAATCCTGTTGTC CCTCCTTCAAATTCAACCGAGTCTTCTGGCATGGGAGATAGTCTGCAGGA CATTGACAAAAAGATCCGAGCTCTGAAGAAAAAGGTATGTACTCTTGTGC TTCTAGTTCTCTGATGGTATGCCATCATTCAAGAGCTATCAAGTAAGTTT GATGCATCTTAAAGCATTTTAGAAATACTCAGCTATTTCTACTTTGCGTT GTATGGTCAAAATACTCTCTATT |
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