SGN Marker CT145
SGN-M52
Synonyms |
Locus associations |
RFLP details |
Insert size
700
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT145 image not available
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Forward sequence
AACTCCTTTTAGCTGCTGAGCAGGAAGCCCAACGCATCGTCAATGTTGCCAGGACTGCTAAACAAGCTAGATTGAAGCAGGCCAAGGAGG
AAGCTGAGAAGGAGATAGCTGAATTTCGTGCTTACATGGAGGCTGAATTTCAAAGAAAGCTTGAACAGACTAGTGGTGACTCAGGTGCTA ATGTCAAACGTCTTGAGATTGAAACTAATGAAAAGATCGAACACCTGAAGACTGAAGCGTCAAGAGTCTCTGCTGATGTTGTCCAAATGC TTCTGAGGCACGTAACCACAGTGAAGAACTAAAATTTTATATGGATGAAGTGTTTCACGCATGTCATTTTGCAGATTTATGCTCCCCCAA TTCATGGTTCTTGTGCTTGATCAGTCCCATGGATGTTCACCATTTGTATCGTATGTTTGTTATCACTATTTATTGTCTTGCTTTGTTGAA TAAAATAACTCATTTGAGCTCCTTTCTATGTATCTTTTGTAAACAAAAGATCAGAAACCAAGGTTCAGCGTCTGGGCAGCATGTCAGTTT CTTATGTATCTAGATTCCAAGGAGTTATGTAGTGAACTTGTCTCTGCAAAAAAAAAAA |
Reverse sequence
TTTTTTTTTTTTTTTTTTTTTGCAGAGACAAGTTCACTACATAACTCCTTGGAATCTAGATACATAAGAAACTGACATGCTGCCCAGACG
CTGAACCTTGGTTTCTGATCTTTTGTTTACAAAAGATACATAGAAAGGAGCTCAAATGAGTTATTTTATTCAACAAAGCAAGACAATAAA TAGTGATAACAAACATACGATACAAATGGTGAACATCCATGGGACTGATCAAGCACAAGAACCATGAATTGGGGGAGCATAAATCTGCAA AATGACATGCGTGAAACACTTCATCCATATAAAATTTTAGTTCTTCACTGGGGTTACGTGCCTCAGAAGCATTTGGACAACATCAGCAGA GACTCTTGACGCTTCAGTCTTCAGGTGTTCGATCTTTTCATTAGTTTCAATCTCAAGACGTTTGACATTAGCACCTGAGTCACCACTAGT CTGTTCAAGCTTTCTTTGAAATTCAGCCTCCATGTAAGCACGAAATTCAGCTATCTCCTTCTCAGCTTCCTCCTTGGCCTGCTTCAATCT AGCTTGTTTAGCAGTCCTGGCAACATTGACGATGCGTT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U146692 | 2.9e-12 | 48 (8.0% of RFLP seq) | + |
SGN-U146692 | 3e-52 | 191 (31.9% of RFLP seq) | + |
SGN-U144368 | 587 (98.2% of RFLP seq) | + | |
SGN-U161079 | 472 (78.9% of RFLP seq) | + | |
SGN-U146692 | 6.9e-10 | 48 (8.3% of RFLP seq) | - |
SGN-U146692 | 6.9e-47 | 158 (27.3% of RFLP seq) | - |
SGN-U161079 | 5e-171 | 438 (75.8% of RFLP seq) | - |
SGN-U144368 | 557 (96.4% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT145 was used as an overgo probe on plate 4 [well H10]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
TGCCAGGACTGCTAAACAAGCTAG
|
B sequence
CTTGGCCTGCTTCAATCTAGCTTG
|
AB sequence
TGCCAGGACTGCTAAACAAGCTAGATTGAA
|
Marker sequence
AACTCCTTTTAGCTGCTGAGCAGGAAGCCCAACGCATCGTCAATGTTGCC
AGGACTGCTAAACAAGCTAGATTGAAGCAGGCCAAGGAGGAAGCTGAGAA GGAGATAGCTGAATTTCGTGCTTACATGGAGGCTGAATTTCAAAGAAAGC TTGAACAGACTAGTGGTGACTCAGGTGCTAATGTCAAACGTCTTGAGATT GAAACTAATGAAAAGATCGAACACCTGAAGACTGAAGCGTCAAGAGTCTC TGCTGATGTTGTCCAAATGCTTCTGAGGCACGTAACCACAGTGAAGAACT AAAATTTTATATGGATGAAGTGTTTCACGCATGTCATTTTGCAGATTTAT GCTCCCCCAATTCATGGTTCTTGTGCTTGATCAGTCCCATGGATGTTCAC CATTTGTATCGTATGTTTGTTATCACTATTTATTGTCTTGCTTTGTTGAA TAAAATAACTCATTTGAGCTCCTTTCTATGTATCTTTTGTAAACAAAAGA TCAGAAACCAAGGTTCAGCGTCTGGGCAGCATGTCAGTTTCTTATGTATC TAGATTCCAAGGAGTTATGTAGTGAACTTGTCTCTGCAAAAAAAAAAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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