SGN Marker TG250

SGN-M552

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1800
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG250 image not available
Forward sequence
TCCTAGATATGCTTGTGCAATTGTCCTTTTTCCACAACACAGTAGCAACAAATGGGAAAATACACAAGAACATACATTACAAGGCAACAG
GTGAATAAGTATCTGGTGAAATTTACAGCAAGTTCTTTAAGTTCACTTGTACACAAATAGCTCACATGCATGTGCAGAAGGCAGGAACAT
GGATATTTGTCATTGATGCTGGTGACTTGGTGGTAAAGTGAATTAAATGATACGTACCTTGTCTAAGTATGAATCCAGGCATGGAATTCG
GCGCCTGGACATTACAAGCTGGGAAATAAAAGCAGTCCATCGATAAGAAAAGGTTCCAGCAATAATTAAGGGCCATAACAATACATTTCA
TATCAAGTTCATAAACAAAATTTGGCATGCTATTGGACCATTACACATATTCATTTAACACATGATTCCTCAATGAATTCTCTAATAATC
AAATACTTCTATACGCTTTAGAAGATTAGAAGGAAATGACATATTTCATTTGCTATACTTCTA
Reverse sequence
TATAGGGAGACAGCCTGCATGCCTGCAGATAAAAATCACGATTGTGCTTAAAGTATTTATTGGTAAATAAAAAATCAGATTTCAAAAGTA
TCTTGACAACCCAAATCAACCTGCTTAACAGAAGTTGTATATGCAGTTCCTAGGACTATCAACCTAATCTCATGTTGCTTTTAATTCATT
AAATTAAGTAGAGATCTCCTTCTCCGGTTCTCCCAATCTGTATTCTGACAATTCTCAAACACCTTCAGTACATGCTGAAATATAAAAAGG
GCTGCCCACTGTACTAAAGCTCCTTCACACATGCTGAAGTATGCAAATGTTAATTTTGATAGGAATAATGCAAATTCTTGGATTTTCAAT
GAGATTAATGATTAACATTTGATATCAGGCCCGTTTTCAGTAATTGATGAGCATTTCAGCACAATTCTTCCTAATAGTTTTGATGCAATT
GGCTTAATGCTCATGATTCGCATCATACACCAGCACCAGGTATATCCCTACACTTCTGTTCTCGTATTAAATTTCAAAGCAAACACAGCT
AGTATTA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1473497.3e-2557 (11.1% of RFLP seq)+
SGN-U1473491.1e-51102 (18.6% of RFLP seq)-
Mapped locations  
Map: Tomato QTL map   
Map version
137 (location: 53878)
Chromosome
2
Position
90.50 cM
Confidence
uncalculated
Protocol
RFLP

Dry_matter_weight_dmw2_1 Titratable_acidity_ta2_1 Eugenol_content_eug2_1 Fruit_weight_fw2_1Soluble_solid_content_ssc2_1 Sugar_content_suc2_1 3_Methylthio_propanal_content_mta2_1 Hex_3_en_1_ol_content__x3o2_1 Fruit_diameter_fd2_1 Color_a_a2_1 Dry_matter_weight_dmw2_2 Sugar_content_suc2_2 Soluble_solid_content_ssc2_2 Color_L_L2_1 Fruit_weight_fw2_2Titratable_acidity_ta2_2 Dry_matter_weight_dmw2_3 Color_b_b2_1Fruit_diameter_fd2_2 Elasticity_ela2_1 Carotene_content_car2_1 2_Isobutylthiazole_content_ibt2_1
Tomato QTL map

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9450)
Chromosome
2
Position
123.00 cM
Confidence
I
Protocol
RFLP
Subscript
A


Tomato-EXPEN 1992

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9451)
Chromosome
2
Position
123.00 cM
Confidence
I
Protocol
RFLP
Subscript
B


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG250 was used as an overgo probe on plate 16 [well F10]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
ATGAATCCAGGCATGGAATTCGGC
B sequence
CTTGTAATGTCCAGGCGCCGAATT
AB sequence
ATGAATCCAGGCATGGAATTCGGCGCCTGG
Marker sequence
TCCTAGATATGCTTGTGCAATTGTCCTTTTTCCACAACACAGTAGCAACA
AATGGGAAAATACACAAGAACATACATTACAAGGCAACAGGTGAATAAGT
ATCTGGTGAAATTTACAGCAAGTTCTTTAAGTTCACTTGTACACAAATAG
CTCACATGCATGTGCAGAAGGCAGGAACATGGATATTTGTCATTGATGCT
GGTGACTTGGTGGTAAAGTGAATTAAATGATACGTACCTTGTCTAAGTAT
GAATCCAGGCATGGAATTCGGCGCCTGGACATTACAAGCTGGGAAATAAA
AGCAGTCCATCGATAAGAAAAGGTTCCAGCAATAATTAAGGGCCATAACA
ATACATTTCATATCAAGTTCATAAACAAAATTTGGCATGCTATTGGACCA
TTACACATATTCATTTAACACATGATTCCTCAATGAATTCTCTAATAATC
AAATACTTCTATACGCTTTAGAAGATTAGAAGGAAATGACATATTTCATT
TGCTATACTTCTA
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG250  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D552 marker 552
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