SGN Marker TG269

SGN-M590

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1090
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG269 RFLP image
Forward sequence
GGGAGACAGCTTGCATGCCTGCAGGGTATTGTTACACCACCCATTGGATGATCGAAGCCAAATTCTTCCTCAGCTTGACTAAGCAAGTCT
TGAAATAAAGGTTGGCTCAAGAATGAAATGGGAATTACAAATCTCTTCTTTTGTTTCTCCCCAACATAAACAGCAAAGTGGCCTTTAGGA
ACATCTGCGACTGTAGAGGACTTCTTGATTATACGAGGCATACGGATAGCCATGGTCTTTTAGTTCAATATATAGATGAGGAAATAAGGA
AGGGAAGAATTTGTAAGGACTCTGAAAGAACAGATAAGCTTTGTATGACTTAAATTTTTGGTCAGAGCTGTTATGGTAAACCCTTCTTTA
TATGTGTTTATATAGGCCAATGACAAGTTGTCAAACCCCACTGATGTCTGAATATACATTTTGTGGACACCAGCTAAAGACAGTAGCACC
TGAAGTATCACATGGTTTTGCCTTCCAACTCATTGTCAGAGTATTAATACATTGAAAGTAATCAATCTAAAAGCATAAGGT
Reverse sequence
TGAGGATATGTTCATTGATCTCACATCTTGCTTGCGGAAATGAGAAAGAAACCAGTTCCCAATTTTGCTTGCACAATTTTGTGTAGTTGT
AAAACAGGATCTCCACTACGTACAGTTCAGAGTTAGAAGAAACTCTAGGTAGACTGAGGATACATTTTTCTACTTCAAAAGAAATTGAAG
TAATAAAGCTTTTTACTTCTATGGTTCAACCATTCTATTCCATATATTGAATGTAATAAATTCATTGCAATATAATTTTTTTTCTCAACT
CTCATGACTTGCTAATCTGAATTGAGATATTTAGATTTTCTAAACTATATGAATAAATCATGGTTTACTGTTACCGAGAGGTTTATGGTT
CGGTCTCAACCTTGAGTATATTTTTGTTACACAATCAGTTTCTTTCTCAAAAGTATCCTTAAAGTTATACTCACTGATCCCTTTGCTTTA
GCATTATGGATGATCAAGTTTTATAAAAAAATCTTCAGAT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1466479.5e-0629 (5.5% of RFLP seq)+
SGN-U1728593.9e-0857 (10.7% of RFLP seq)+
SGN-U1669673e-24152 (28.6% of RFLP seq)+
SGN-U1466451.4e-38168 (31.6% of RFLP seq)+
SGN-U1466449.9e-46168 (31.6% of RFLP seq)+
SGN-U1466481e-48149 (28.1% of RFLP seq)+
SGN-U1466468.5e-71234 (44.1% of RFLP seq)+
SGN-U1466478.5e-71218 (41.1% of RFLP seq)+
SGN-U1466447e-2589 (18.2% of RFLP seq)-
SGN-U1466457e-25205 (41.8% of RFLP seq)-
SGN-U1466485e-35202 (41.2% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9558)
Chromosome
1
Position
130.20 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG269 was used as an overgo probe on plate 3 [well D7]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
ATGCCTGCAGGGTATTGTTACACC
B sequence
CGATCATCCAATGGGTGGTGTAAC
AB sequence
ATGCCTGCAGGGTATTGTTACACCACCCAT
Marker sequence
GGGAGACAGCTTGCATGCCTGCAGGGTATTGTTACACCACCCATTGGATG
ATCGAAGCCAAATTCTTCCTCAGCTTGACTAAGCAAGTCTTGAAATAAAG
GTTGGCTCAAGAATGAAATGGGAATTACAAATCTCTTCTTTTGTTTCTCC
CCAACATAAACAGCAAAGTGGCCTTTAGGAACATCTGCGACTGTAGAGGA
CTTCTTGATTATACGAGGCATACGGATAGCCATGGTCTTTTAGTTCAATA
TATAGATGAGGAAATAAGGAAGGGAAGAATTTGTAAGGACTCTGAAAGAA
CAGATAAGCTTTGTATGACTTAAATTTTTGGTCAGAGCTGTTATGGTAAA
CCCTTCTTTATATGTGTTTATATAGGCCAATGACAAGTTGTCAAACCCCA
CTGATGTCTGAATATACATTTTGTGGACACCAGCTAAAGACAGTAGCACC
TGAAGTATCACATGGTTTTGCCTTCCAACTCATTGTCAGAGTATTAATAC
ATTGAAAGTAATCAATCTAAAAGCATAAGGT
Genomic location of TG269  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D590 marker 590
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