SGN Marker TG198

SGN-M592

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
890
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG198 image not available
Forward sequence
CGTGCGGGGGCACCAATTGCCCTTGAGGCCCAAGACTTCTTCGCTGGAGAAAGCGTATCACACCCCTGCATAATTTCCTGAAATAATATC
AGATTGCTCTTTTACATCACACATAATAAGATTTCTTGTTGACATATGTCATGGATATACTGTACAATTGAACATTCGGACTTACGATAT
TGTCACACCCATTAAGCTTAAAATTGGGTTCGCATGATATATCAGGAAAATCGTCTGGAGAACGCCTAGAATGCATCCCATGAAAATGGC
AGTTGAAGCTGATGGAATATGCCGCTTCACACGTCTGAGTTCCTCAGAGCCACATTT
Reverse sequence
GGGGCACCATTGCCCTCAAGGTCAAATACTTCTTCGCTGGAGAAAGCATAGCAGAACCCTGCATAATTTCGTGAAATAAAATCATATTGC
TCTTTTACATCACACATAATAAGATTTCTTGTTGACATATGTTATGATATAATGTACGATTGAACATTCGTACTTACAGATTTCACACCC
ATTAAGCTTAAAATTGGTTTCGCAAGAAATATGAGGAAAATCGTCTGGAGAACGCCAAGAATGCATCCCATGAGAATTGCAGTTGAAGCT
GATGGAATATGCCGCTTCACACGTTTGAGTTCCAAAGAGTCACATTTCGTCGTCTTACATTCTGTAAAAATAGCATTATTTTGTTTAGTT
ATGATGAAAAATTAGACTGTCAGTTAAAACTCGTAACATATACCTTGTGCTAACACGGTCTCTTTGGTTTCTGTCTTGTCATTGTTATTA
CCATCAGTTAGTACTAGCTGTTTTGTTGAATCATTCTTCTCCAAATCAGCAATTC
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1726683.8e-1048 (14.7% of RFLP seq)+
SGN-U1726682.5e-51145 (44.3% of RFLP seq)+
SGN-U1726683.7e-0829 (5.7% of RFLP seq)-
SGN-U1726686.7e-1959 (11.7% of RFLP seq)-
SGN-U1726681.6e-90167 (33.1% of RFLP seq)-
Mapped locations  
Map: Eggplant-COSII   
Map version
63 (location: 42417)
Chromosome
1
Position
66.50 cM
Confidence
I
Protocol
RFLP


Eggplant-COSII

Map: Tomato-EXHIR 1997   
Map version
32 (location: 9562)
Chromosome
1
Position
80.40 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXHIR 1997

Map: Eggplant-LXM 2002   
Map version
29 (location: 9564)
Chromosome
1
Position
84.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Eggplant-LXM 2002

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9563)
Chromosome
1
Position
35.80 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG198 was used as an overgo probe on plate 14 [well C12]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
CTGATGGAATATGCCGCTTCACAC
B sequence
TCTGAGGAACTCAGACGTGTGAAG
AB sequence
CTGATGGAATATGCCGCTTCACACGTCTGA
Marker sequence
CGTGCGGGGGCACCAATTGCCCTTGAGGCCCAAGACTTCTTCGCTGGAGA
AAGCGTATCACACCCCTGCATAATTTCCTGAAATAATATCAGATTGCTCT
TTTACATCACACATAATAAGATTTCTTGTTGACATATGTCATGGATATAC
TGTACAATTGAACATTCGGACTTACGATATTGTCACACCCATTAAGCTTA
AAATTGGGTTCGCATGATATATCAGGAAAATCGTCTGGAGAACGCCTAGA
ATGCATCCCATGAAAATGGCAGTTGAAGCTGATGGAATATGCCGCTTCAC
ACGTCTGAGTTCCTCAGAGCCACATTT
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG198  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D592 marker 592
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