SGN Marker TG415
SGN-M599
Synonyms |
Locus associations |
RFLP details |
Insert size
2200
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG415 image not available
|
Forward sequence
GGAGACACCTTGCATGCCTGCAGCTTTAGTTTTGTCAGCATAGCTATCTTCCATCAAATGTGAGATACCTTGTAGGGGGACTTCGTTTTC
TGCTATTTGGACATGCTACCTGAGATCTGTAATTGAGCTTTTTAACAATTATTAACAATGAATGCTGCTGTTTCCGGACAAATTATGCAG TTGAACTCCTTATTAACTCCATTGAACTTCTTAGAACCTAACCTTGATATTTCCTGAAGAATAACTCCAATGAACTTCCTAGACTCCCAA GTAGTTGGGCAAATTCTTCTTCCAATCATTGCAATCCTTCTGAAACAAATATTCTATCCATAATCTATTTGCACTGCGATATGGCGGTGT TCAGCTAAGCTGAGATCTGGAAACTAATCTGTTAATGGTGTGTTCCCCATCATTCATTATATATATATTATATATACACACACACACATA CATACACTCAAAAGTATGTTCTTCTACTGTTCCTACCTTATACTCTGAGTATTAGCATATAAAGCTTCCCATTGGATCCTGATGTGCGTT TAA |
Reverse sequence
TAATTTCATGTGCGTCATAAGACAAATTTGAGCCCCCAGATGGAAATTTTTCAAGCGTTGCTTCACAACCTACTTAAAGCTTAATTTACA
AGGAAGTGGCTGAGATCACGAAAGAAGTGAGACGAGAGAAACAAACTCCAAAGTCACCCGTCCCTTGGAACGTGTATTGATGACAAAATG CTCTGGGTATTTTCTCAAAAGCATCAGCAATCCATACCATGGCTTGGATTTAGCTTCAGCGCTAGGATAGTCCTCAGATGTCAAGTATCT CCTCACACGACTATGGTGCCAGGTATTGCCATAGTGTTCCACCAACTGCACATTGTTATTCAAAAATCCAACTATGACAACTTAAAAAGA TTTATAAGCCAACTATCAAAAAGCTGACAAAGAAAATCTTTCCCACAACTATGGCAAACAACAGGGCAATGATATTCGATAACAGGATGG GAAGACAAAATAATATA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U168464 | 6e-53 | 212 (45.4% of RFLP seq) | - |
SGN-U170853 | 2e-120 | 217 (46.5% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG415 was used as an overgo probe on plate 16 [well F8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
ATCTATTTGCACTGCGATATGGCG
|
B sequence
CAGCTTAGCTGAACACCGCCATAT
|
AB sequence
ATCTATTTGCACTGCGATATGGCGGTGTTC
|
Marker sequence
GGAGACACCTTGCATGCCTGCAGCTTTAGTTTTGTCAGCATAGCTATCTT
CCATCAAATGTGAGATACCTTGTAGGGGGACTTCGTTTTCTGCTATTTGG ACATGCTACCTGAGATCTGTAATTGAGCTTTTTAACAATTATTAACAATG AATGCTGCTGTTTCCGGACAAATTATGCAGTTGAACTCCTTATTAACTCC ATTGAACTTCTTAGAACCTAACCTTGATATTTCCTGAAGAATAACTCCAA TGAACTTCCTAGACTCCCAAGTAGTTGGGCAAATTCTTCTTCCAATCATT GCAATCCTTCTGAAACAAATATTCTATCCATAATCTATTTGCACTGCGAT ATGGCGGTGTTCAGCTAAGCTGAGATCTGGAAACTAATCTGTTAATGGTG TGTTCCCCATCATTCATTATATATATATTATATATACACACACACACATA CATACACTCAAAAGTATGTTCTTCTACTGTTCCTACCTTATACTCTGAGT ATTAGCATATAAAGCTTCCCATTGGATCCTGATGTGCGTTTAA |
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