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SGN Marker TG415

SGN-M599

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
2200
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG415 image not available
Forward sequence
GGAGACACCTTGCATGCCTGCAGCTTTAGTTTTGTCAGCATAGCTATCTTCCATCAAATGTGAGATACCTTGTAGGGGGACTTCGTTTTC
TGCTATTTGGACATGCTACCTGAGATCTGTAATTGAGCTTTTTAACAATTATTAACAATGAATGCTGCTGTTTCCGGACAAATTATGCAG
TTGAACTCCTTATTAACTCCATTGAACTTCTTAGAACCTAACCTTGATATTTCCTGAAGAATAACTCCAATGAACTTCCTAGACTCCCAA
GTAGTTGGGCAAATTCTTCTTCCAATCATTGCAATCCTTCTGAAACAAATATTCTATCCATAATCTATTTGCACTGCGATATGGCGGTGT
TCAGCTAAGCTGAGATCTGGAAACTAATCTGTTAATGGTGTGTTCCCCATCATTCATTATATATATATTATATATACACACACACACATA
CATACACTCAAAAGTATGTTCTTCTACTGTTCCTACCTTATACTCTGAGTATTAGCATATAAAGCTTCCCATTGGATCCTGATGTGCGTT
TAA
Reverse sequence
TAATTTCATGTGCGTCATAAGACAAATTTGAGCCCCCAGATGGAAATTTTTCAAGCGTTGCTTCACAACCTACTTAAAGCTTAATTTACA
AGGAAGTGGCTGAGATCACGAAAGAAGTGAGACGAGAGAAACAAACTCCAAAGTCACCCGTCCCTTGGAACGTGTATTGATGACAAAATG
CTCTGGGTATTTTCTCAAAAGCATCAGCAATCCATACCATGGCTTGGATTTAGCTTCAGCGCTAGGATAGTCCTCAGATGTCAAGTATCT
CCTCACACGACTATGGTGCCAGGTATTGCCATAGTGTTCCACCAACTGCACATTGTTATTCAAAAATCCAACTATGACAACTTAAAAAGA
TTTATAAGCCAACTATCAAAAAGCTGACAAAGAAAATCTTTCCCACAACTATGGCAAACAACAGGGCAATGATATTCGATAACAGGATGG
GAAGACAAAATAATATA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1684646e-53212 (45.4% of RFLP seq)-
SGN-U1708532e-120217 (46.5% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9585)
Chromosome
9
Position
56.40 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG415 was used as an overgo probe on plate 16 [well F8]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
ATCTATTTGCACTGCGATATGGCG
B sequence
CAGCTTAGCTGAACACCGCCATAT
AB sequence
ATCTATTTGCACTGCGATATGGCGGTGTTC
Marker sequence
GGAGACACCTTGCATGCCTGCAGCTTTAGTTTTGTCAGCATAGCTATCTT
CCATCAAATGTGAGATACCTTGTAGGGGGACTTCGTTTTCTGCTATTTGG
ACATGCTACCTGAGATCTGTAATTGAGCTTTTTAACAATTATTAACAATG
AATGCTGCTGTTTCCGGACAAATTATGCAGTTGAACTCCTTATTAACTCC
ATTGAACTTCTTAGAACCTAACCTTGATATTTCCTGAAGAATAACTCCAA
TGAACTTCCTAGACTCCCAAGTAGTTGGGCAAATTCTTCTTCCAATCATT
GCAATCCTTCTGAAACAAATATTCTATCCATAATCTATTTGCACTGCGAT
ATGGCGGTGTTCAGCTAAGCTGAGATCTGGAAACTAATCTGTTAATGGTG
TGTTCCCCATCATTCATTATATATATATTATATATACACACACACACATA
CATACACTCAAAAGTATGTTCTTCTACTGTTCCTACCTTATACTCTGAGT
ATTAGCATATAAAGCTTCCCATTGGATCCTGATGTGCGTTTAA
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG415  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D599 marker 599
User comments 
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