SGN Marker TG280

SGN-M626

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1500
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG280 image not available
Forward sequence
GGGAGACAGCTTGCATGCCTGCAGTTTGAAAACTTTAGACCTCAGCAACAATAACTTAGAAGGAAAAGTTCCAAGATCCCTGCAAAGATG
TGCATTTCTAGAGGTTTTGAACATCGGAAACAACAAGATTAGAGATATATTCCCGTGTATGTTGAAAACATTACCCAGTTTGCACGTCCT
GGTCCTGAGGTCAAACAAGTTTTATGGAGATCTCCAGTGTCGTATAGCTAATTAAACATGGCCAAAGCTTCAAATTGTAGATATTGCTTA
CAACAATTTCAGGGGAGCACGGCTACCACATTACTGCTCGAGCTGGGAAGGCATGATGAAGAGCAGAAATCCAGAGCCACGACTACAGTA
CTTGAAAGTTGAAATCACCAACTATGTTCTCTACTATCGAAATAGAGTGACTTTATTTCTGCAAATTCTTAAGATTACTATATTAGTGAT
CTCTATTCATTTCAGTAGATTACTCTATAACAGTCATTTATTAGAGAGTAAACCACAAGCTCCACCCTATGGAGCCTCCC
Reverse sequence
TATCAACGTGATATCGCATACCTGAATAGTTGTAAAATAACAGAAATACCCTGTGCTTTCAATCCAGGTTGCTTTGGCACTTAATTTATC
GAAAAGAAAACAAGTATTTCTTTCTAAACAGTTGCCTTAGAAAACCAAAATAAAATACATATTCAAAAACCAATTTATCACACGCTTATA
CAACAATATGTAAAACATTGAACTTAAAAGCTTATATGTGATATATCAACAATATTACTAGCCTTTTGTTCTACAACAAACCTCCAGAAA
TGAGCATTTTCCAAGGAACCTGGAACTTTTCCTTCTAATATTTTACTGCTGAGGTTAAAGTTTTCAAATTACAATTCAGTGGAAATATGT
CAGGAATAATGCCACTGAGTTTGTTATTTGACATATCAAGAATTTGAAGCTTGTCTAGACTGTACATGGAAGAGGGTATTGATCCTGTAA
ATTCATTATTGGCAATCGAAAAGTAGGTAAGAGAAGTAGGT
RFLP sequence matches to unigenesNone
Mapped locations  
Map: Potato meta-QTL consensus map   
Map version
107 (location: 53250)
Chromosome
10
Position
58.16 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_10 MQTL_2_Late_blight_10
Potato meta-QTL consensus map

Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 50362)
Chromosome
10
Position
58.80 MB
Confidence
uncalculated
Protocol
unknown


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 48296)
Chromosome
10
Position
29.23 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Eggplant-COSII   
Map version
63 (location: 42431)
Chromosome
10
Position
84.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Eggplant-COSII

Map: Tomato-EXPEN 2000   
Map version
52 (location: 39975)
Chromosome
10
Position
40.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Tomato-EXPEN 2000

Map: Eggplant-LXM 2002   
Map version
29 (location: 9660)
Chromosome
10
Position
67.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Eggplant-LXM 2002

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9659)
Chromosome
10
Position
34.60 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 9663)
Chromosome
10
Position
15.60 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG280 was used as an overgo probe on plate 15 [well A5]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
GCTACCACATTACTGCTCGAGCTG
B sequence
CTTCATCATGCCTTCCCAGCTCGA
AB sequence
GCTACCACATTACTGCTCGAGCTGGGAAGG
Marker sequence
GGGAGACAGCTTGCATGCCTGCAGTTTGAAAACTTTAGACCTCAGCAACA
ATAACTTAGAAGGAAAAGTTCCAAGATCCCTGCAAAGATGTGCATTTCTA
GAGGTTTTGAACATCGGAAACAACAAGATTAGAGATATATTCCCGTGTAT
GTTGAAAACATTACCCAGTTTGCACGTCCTGGTCCTGAGGTCAAACAAGT
TTTATGGAGATCTCCAGTGTCGTATAGCTAATTAAACATGGCCAAAGCTT
CAAATTGTAGATATTGCTTACAACAATTTCAGGGGAGCACGGCTACCACA
TTACTGCTCGAGCTGGGAAGGCATGATGAAGAGCAGAAATCCAGAGCCAC
GACTACAGTACTTGAAAGTTGAAATCACCAACTATGTTCTCTACTATCGA
AATAGAGTGACTTTATTTCTGCAAATTCTTAAGATTACTATATTAGTGAT
CTCTATTCATTTCAGTAGATTACTCTATAACAGTCATTTATTAGAGAGTA
AACCACAAGCTCCACCCTATGGAGCCTCCC
Genomic location of TG280  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D626 marker 626
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