SGN Marker TG496
SGN-M641
Synonyms |
Locus associations |
RFLP details |
Insert size
1400
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
not available
|
Reverse sequence
TGGAAGTGAGAGATTTCATTGGCGGAGATAGAGAACGGCGACGGCAGCATCTAATCTGTGCCCGGCGAAGTAGATTAGGTTAGAATTAGG
ATTATAGAATTAGTACTATTAGTTAGAAAAAGATTCGTGAATACTGTACGTCTTTGAAAACAGTGCCCCTTGAGAAAATGAATATCTTAT GGGTCCTGTTTGGCGCTTTTCATTTTCGAGAGCGGGTCCACTGCCAAACACACTACCAACTTCGTTCATTTCATTTATTAGTTACATGCA TAAATACAAACGTTATTTTACAAACCAGTATCAACATACCCACCCAGCAGCAGTGTAATCCCATCACGTTTATGTTTGCCAAACAAAAGA ATAAAATTATTCCTATCTAACAGAAGACATGATGTCCACATATAAATTGGGTCCAACGGTACCAGATCCATCTCTCCATTTATGCCATGG CAATTTG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U146102 | 1.5e-16 | 51 (11.2% of RFLP seq) | - |
SGN-U148179 | 1.2e-72 | 137 (30.0% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG496 was used as an overgo probe on plate 12 [well B5]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TATGGGTCCTGTTTGGCGCTTTTC
|
B sequence
ACCCGCTCTCGAAAATGAAAAGCG
|
AB sequence
TATGGGTCCTGTTTGGCGCTTTTCATTTTC
|
Marker sequence
TGGAAGTGAGAGATTTCATTGGCGGAGATAGAGAACGGCGACGGCAGCAT
CTAATCTGTGCCCGGCGAAGTAGATTAGGTTAGAATTAGGATTATAGAAT TAGTACTATTAGTTAGAAAAAGATTCGTGAATACTGTACGTCTTTGAAAA CAGTGCCCCTTGAGAAAATGAATATCTTATGGGTCCTGTTTGGCGCTTTT CATTTTCGAGAGCGGGTCCACTGCCAAACACACTACCAACTTCGTTCATT TCATTTATTAGTTACATGCATAAATACAAACGTTATTTTACAAACCAGTA TCAACATACCCACCCAGCAGCAGTGTAATCCCATCACGTTTATGTTTGCC AAACAAAAGAATAAAATTATTCCTATCTAACAGAAGACATGATGTCCACA TATAAATTGGGTCCAACGGTACCAGATCCATCTCTCCATTTATGCCATGG CAATTTG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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