SGN Marker C2_At1g03820

SGN-M6491
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle309861 (SGN)
130005 (CGN)
---
Lycopersicon CombinedSingleSGN-U227469---
Solanum tuberosumMultipleSGN-U266898---
ArabidopsisSingleAt1g03820 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38056)
Chromosome
7
Position
43.00 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 40984
Forward primer (5'-3')
ATGATTTCTCCGAGAATTACAACAAC
Accessions and product sizes
Solanum pennellii TA56
800
Solanum lycopersicum TA209
800
Approximate temperature
55°C
Reverse primer (5'-3')
AAGTTCATACTGATCCTCAGTGCCTGG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
800
Solanum pennellii TA56
450
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24888)
Chromosome
1
Position
0.96 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g03820  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6491 marker 6491
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