SGN Marker C2_At1g04290

SGN-M6496
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311823 (SGN)
126717 (CGN)
---
Capsicum annuumSingleSGN-U200463---
Lycopersicon CombinedMultipleSGN-U222146---
Solanum tuberosumSingleSGN-U267453---
ArabidopsisSingleAt1g04290 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 24893)
Chromosome
1
Position
1.15 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 40988
Forward primer (5'-3')
ATGCCTTCAAGATTTATTGAACCCTTTG
Accessions and product sizes
Solanum pennellii TA56
500
Solanum lycopersicum TA209
500
Approximate temperature
53°C
Reverse primer (5'-3')
AGCAGAACCCATAATATCCACCAG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
375
Solanum lycopersicum TA209
425
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g04290  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6496 marker 6496
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