SGN Marker C2_At1g04850

SGN-M6500
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle303894 (SGN)
119831 (CGN)
---
Capsicum annuumSingleSGN-U198221---
Lycopersicon CombinedSingleSGN-U217090---
Solanum tuberosumSingleSGN-U245914---
ArabidopsisSingleAt1g04850 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 24897)
Chromosome
1
Position
1.37 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 40990
Forward primer (5'-3')
TCAGGTGTATCACTGCAGTGTGGTG
Accessions and product sizes
Solanum pennellii TA56
900
Solanum lycopersicum TA209
900
Approximate temperature
58°C
Reverse primer (5'-3')
AACCTCTGCCATGTCTTCATCATCG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
900
Solanum lycopersicum TA209
750
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g04850  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6500 marker 6500
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