SGN Marker C2_At1g04950

SGN-M6503
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle307405 (SGN)
128029 (CGN)
---
Capsicum annuumSingleSGN-U200340---
Lycopersicon CombinedSingleSGN-U226712---
Solanum tuberosumSingleSGN-U248317---
ArabidopsisSingleAt1g04950 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38059)
Chromosome
10
Position
3.00 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39362
Forward primer (5'-3')
ATGAGTATAGTACCGAAAGAGACAATAG
Accessions and product sizes
Solanum lycopersicum TA209
700
Solanum pennellii TA56
700
Approximate temperature
55°C
Reverse primer (5'-3')
TCGAATGATGCATACATTTAATAGCTTC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
275
Solanum lycopersicum TA209
450
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24900)
Chromosome
1
Position
1.41 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g04950  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6503 marker 6503
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