SGN Marker C2_At1g08820

SGN-M6551
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302971 (SGN)
122707 (CGN)
---
Lycopersicon CombinedSingleSGN-U223143---
Solanum tuberosumSingleSGN-U248960---
ArabidopsisSingleAt1g08820 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38076)
Chromosome
1
Position
102.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39374
Forward primer (5'-3')
TCAAGACTACTAGTCCAAAGAAATATTG
Accessions and product sizes
Solanum pennellii TA56
1050
Solanum lycopersicum TA209
1050
Approximate temperature
55°C
Reverse primer (5'-3')
TCAGGAGGAGGTGCCTTTTGTGC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
1050
Solanum lycopersicum TA209
600
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24949)
Chromosome
1
Position
2.82 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g08820  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6551 marker 6551
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