SGN Marker C2_At1g15140

SGN-M6617
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U200199---
Lycopersicon CombinedSingleSGN-U215618---
Solanum tuberosumSingleSGN-U246746---
ArabidopsisSingleAt1g15140 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38104)
Chromosome
5
Position
35.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39396
Forward primer (5'-3')
TTCTTCATCCATGACCCTCCTCAAAC
Accessions and product sizes
Solanum pennellii TA56
2100
Solanum lycopersicum TA209
2100
Approximate temperature
60°C
Reverse primer (5'-3')
AAATCCTTTCCCCATAACCTGACTC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
1100
Solanum lycopersicum TA209
900
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25019)
Chromosome
1
Position
5.21 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g15140  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6617 marker 6617
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