SGN Marker C2_At1g17200

SGN-M6640
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U198819---
Lycopersicon CombinedSingleSGN-U222706---
Solanum tuberosumSingleSGN-U253473---
ArabidopsisSingleAt1g17200 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38112)
Chromosome
7
Position
46.00 cM
Confidence
F(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41042
Forward primer (5'-3')
AGCAGTATGAGAACAGCTGAGACTATG
Accessions and product sizes
Solanum lycopersicum TA209
950
Solanum pennellii TA56
950
Approximate temperature
55°C
Reverse primer (5'-3')
AATAACCTGCACAAATTCCATTTGC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
325
Solanum lycopersicum TA209
300
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25042)
Chromosome
1
Position
5.88 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g17200  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6640 marker 6640
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