SGN Marker C2_At1g20080

SGN-M6667
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201375---
Lycopersicon CombinedSingleSGN-U219836---
ArabidopsisSingleAt1g20080 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38124)
Chromosome
1
Position
163.70 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39412
Forward primer (5'-3')
TCTGATCCTTACGTAAAACTTAAGCTC
Accessions and product sizes
Solanum pennellii TA56
200
Solanum lycopersicum TA209
200
Approximate temperature
55°C
Reverse primer (5'-3')
TCAAATCTTTCAGTGGAATAACGTTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
200
Solanum pennellii TA56
125
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25071)
Chromosome
1
Position
6.96 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g20080  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6667 marker 6667
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