SGN Marker CT263
SGN-M668
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
300
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
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Forward sequence
TTTTTTTTTTTTTTAATTGAGAGGAACACTAGGGTGACCATCAGCATCCTTATCTCCTCTTCCATGCTTATATTGTGGGACCACCTGATC
TTGTGAGGAAATGATGGATGACATTCTTCTAGTTTTTTTCTCAACATCTATTCTGCTTCCGCTGCTCAAGTTGATATCTGAGGTAGAAAA TCTGCGTCGTCTTTCTTTAGGAGTATCAAGGGTTGAATCTGTACTATCGGGCAAATGGCGGTTGAGCGGAAAAATAGGGGCGGCGTTACT ATAATTCTCCAGCAAAGTTTGAACAAAA |
|
Reverse sequence
TTTTTTTTTTTTTTAATTGAGAGGAACACTATGGTGACCATCATCATCCTTATCTCCACTTCCATGCTTATTTTGCGGGCACCTCCTGCA
TCTTGTGAGGAAATGATGGATAGACATTCTTCTAGATTTTTTCTCAACATACTATTCTGCATTCCGCTGCTCATGATTGATATCTGAGGA ACAAAATCT |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U154368 | 2e-138 | 284 (95.3% of RFLP seq) | + |
| SGN-U154368 | 1.3e-45 | 175 (92.6% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
|  Tomato-EXHIR 1997 |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
CT263 was used as an overgo probe on plate 3 [well D11]
Plausible BAC Matches: P266J03, P198J21, P114P24, P112H15
Overgo Sequences
|
A sequence
TGAGAGGAACACTAGGGTGACCAT
|
|
B sequence
GGAGATAAGGATGCTGATGGTCAC
|
|
AB sequence
TGAGAGGAACACTAGGGTGACCATCAGCAT
|
|
Marker sequence
TTTTTTTTTTTTTTAATTGAGAGGAACACTAGGGTGACCATCAGCATCCT
TATCTCCTCTTCCATGCTTATATTGTGGGACCACCTGATCTTGTGAGGAA ATGATGGATGACATTCTTCTAGTTTTTTTCTCAACATCTATTCTGCTTCC GCTGCTCAAGTTGATATCTGAGGTAGAAAATCTGCGTCGTCTTTCTTTAG GAGTATCAAGGGTTGAATCTGTACTATCGGGCAAATGGCGGTTGAGCGGA AAAATAGGGGCGGCGTTACTATAATTCTCCAGCAAAGTTTGAACAAAA |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of CT263
|
| User comments |
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