SGN Marker C2_At1g25290

SGN-M6703
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle306512 (SGN)
126111 (CGN)
---
Lycopersicon CombinedSingleSGN-U221269---
ArabidopsisSingleAt1g25290 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25108)
Chromosome
1
Position
8.87 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41058
Forward primer (5'-3')
ACCAACGCCGCCGCTCTCC
Accessions and product sizes
Solanum pennellii TA56
475
Solanum lycopersicum TA209
475
Approximate temperature
55°C
Reverse primer (5'-3')
AAGAATGATCTTGATGACTTTGAGTATG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
475
Solanum lycopersicum TA209
300
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g25290  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6703 marker 6703
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