SGN Marker C2_At1g28120

SGN-M6729
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle303165 (SGN)
121167 (CGN)
---
Lycopersicon CombinedSingleSGN-U220507---
Solanum tuberosumSingleSGN-U255885---
ArabidopsisSingleAt1g28120 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38149)
Chromosome
4
Position
56.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39434
Forward primer (5'-3')
ATGACTGGAAAAAATACAAGGATGATG
Accessions and product sizes
Solanum lycopersicum TA209
325
Solanum pennellii TA56
325
Approximate temperature
55°C
Reverse primer (5'-3')
TAATGGCAGCATACTGTTCACTCAG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
325
Solanum lycopersicum TA209
175
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25134)
Chromosome
1
Position
9.81 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g28120  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6729 marker 6729
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