SGN Marker TG147

SGN-M68

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
3620
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG147 RFLP image
Forward sequence
TTATAGTTGCTCGGACTCTCCAAAACTGATGCCACACCTGTGCTGAATCCTCCAAAATACACTGTTTTTGGAAGATCCGACATGAACCTG
GCAACATTGCTAAAGAGTCTGAGCAACATAGACTATAAACACAACCACCATAGTCAAACCTGAGGCAGGAGATGCACAAGGTAGCAGGAA
AATATTAAGTCAAAAATATCATAAGGGGAGTACTGGGATATGTAGGCCACTGGTTGTAATTTACTATTTCTCGTTGTTAATAAGGTTGTG
TGTCTGTATGTGTTCTCACCCAAACTTAAAGCTGAAATGACATTAATAGGCCTCAGAAACTGTTCTCTTGAGAGAAAACTAGCTGGTATT
GATTGTTCCATTCAAAGTTCATGGATTTATTTGTTTGGTCCAAGATTCGTTCTTTCTCCATTCAACTTTTGCTATATATGAATCTCCAGA
GTTGTTGCTT
Reverse sequence
CAGAATCAGTAAATGTAAATGAGAAAATATTGGATATTTATATAAATCAGATGCTTCCACTATTTTGTACTGAGGTTAATGATGATGCAA
ACTTTGCAACTACTGCTGCTTGTGACATTCAGCTCTTGCAGGTAAATATTTATTCGCATTCAATATTTTTATTAAATTAAATAATTTAAT
TTTATAATTAACAATTAAATTAAATATTATATCACTTAATCGTAATTAAATAAAAAAATAACTGTACGAAAGAAAACACGTCTTGCATTC
GAGTTGTTTGTTGTAAACACAAAATATGAGTAACTTTTTTTTTTTTAAAACTCAAAATAAGATCACGATCCATTGACTAATATATGTCGC
TATATATATAACTTATATAATGAAACAATTTATTTTATTATTGTAATATAAATAATCGAATAAATAATTTTGAGATTGGACAAATACTCC
CAATTAATCAAATACAAAATAAAA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1576171.6e-1952 (11.0% of RFLP seq)-
SGN-U1518761.2e-69132 (27.8% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPIMP 2009   
Map version
126 (location: 53515)
Chromosome
11
Position
37.75 cM
Confidence
uncalculated
Protocol
RFLP


Tomato-EXPIMP 2009

Map: Potato meta-QTL consensus map   
Map version
107 (location: 53183)
Chromosome
11
Position
27.39 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_11 MQTL_1_Maturity_11 MQTL_2_Late_blight_11 MQTL_2_Maturity_11
Potato meta-QTL consensus map

Map: Sun1642 x LA1589   
Map version
85 (location: 43834)
Chromosome
11
Position
55.20 cM
Confidence
uncalculated
Protocol
RFLP


Sun1642 x LA1589

Map: Yellow Stuffer x LA1589   
Map version
83 (location: 43584)
Chromosome
11
Position
42.40 cM
Confidence
uncalculated
Protocol
RFLP


Yellow Stuffer x LA1589

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589   
Map version
79 (location: 43294)
Chromosome
11
Position
48.90 cM
Confidence
uncalculated
Protocol
RFLP


Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

Map: Tomato-EXPIMP 2008   
Map version
55 (location: 40835)
Chromosome
11
Position
53.00 cM
Confidence
uncalculated
Protocol
RFLP


Tomato-EXPIMP 2008

Map: Tomato-EXPEN 2000   
Map version
52 (location: 39909)
Chromosome
11
Position
45.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992   
Map version
28 (location: 7940)
Chromosome
11
Position
39.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992

Map: Tomato-EXPIMP 2001   
Map version
26 (location: 7943)
Chromosome
11
Position
55.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Tomato-EXPIMP 2001
Overgo hybridization and physical mapping 
TG147 was used as an overgo probe on plate 10 [well D9]

Plausible BAC Matches:   P057O11,   P257I09,   P212I01,   P115N14,   P019L13,   P193L01,   P204D06,   P025M08,   P115P16,   P003P14,   P034I10,   P035F01,   P239O16

 Overgo Sequences

A sequence
TAGTCAAACCTGAGGCAGGAGATG
B sequence
TTCCTGCTACCTTGTGCATCTCCT
AB sequence
TAGTCAAACCTGAGGCAGGAGATGCACAAG
Marker sequence
TTATAGTTGCTCGGACTCTCCAAAACTGATGCCACACCTGTGCTGAATCC
TCCAAAATACACTGTTTTTGGAAGATCCGACATGAACCTGGCAACATTGC
TAAAGAGTCTGAGCAACATAGACTATAAACACAACCACCATAGTCAAACC
TGAGGCAGGAGATGCACAAGGTAGCAGGAAAATATTAAGTCAAAAATATC
ATAAGGGGAGTACTGGGATATGTAGGCCACTGGTTGTAATTTACTATTTC
TCGTTGTTAATAAGGTTGTGTGTCTGTATGTGTTCTCACCCAAACTTAAA
GCTGAAATGACATTAATAGGCCTCAGAAACTGTTCTCTTGAGAGAAAACT
AGCTGGTATTGATTGTTCCATTCAAAGTTCATGGATTTATTTGTTTGGTC
CAAGATTCGTTCTTTCTCCATTCAACTTTTGCTATATATGAATCTCCAGA
GTTGTTGCTT
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG147  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D68 marker 68
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