SGN Marker TG147
SGN-M68
Synonyms |
Locus associations |
RFLP details |
Insert size
3620
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TTATAGTTGCTCGGACTCTCCAAAACTGATGCCACACCTGTGCTGAATCCTCCAAAATACACTGTTTTTGGAAGATCCGACATGAACCTG
GCAACATTGCTAAAGAGTCTGAGCAACATAGACTATAAACACAACCACCATAGTCAAACCTGAGGCAGGAGATGCACAAGGTAGCAGGAA AATATTAAGTCAAAAATATCATAAGGGGAGTACTGGGATATGTAGGCCACTGGTTGTAATTTACTATTTCTCGTTGTTAATAAGGTTGTG TGTCTGTATGTGTTCTCACCCAAACTTAAAGCTGAAATGACATTAATAGGCCTCAGAAACTGTTCTCTTGAGAGAAAACTAGCTGGTATT GATTGTTCCATTCAAAGTTCATGGATTTATTTGTTTGGTCCAAGATTCGTTCTTTCTCCATTCAACTTTTGCTATATATGAATCTCCAGA GTTGTTGCTT |
Reverse sequence
CAGAATCAGTAAATGTAAATGAGAAAATATTGGATATTTATATAAATCAGATGCTTCCACTATTTTGTACTGAGGTTAATGATGATGCAA
ACTTTGCAACTACTGCTGCTTGTGACATTCAGCTCTTGCAGGTAAATATTTATTCGCATTCAATATTTTTATTAAATTAAATAATTTAAT TTTATAATTAACAATTAAATTAAATATTATATCACTTAATCGTAATTAAATAAAAAAATAACTGTACGAAAGAAAACACGTCTTGCATTC GAGTTGTTTGTTGTAAACACAAAATATGAGTAACTTTTTTTTTTTTAAAACTCAAAATAAGATCACGATCCATTGACTAATATATGTCGC TATATATATAACTTATATAATGAAACAATTTATTTTATTATTGTAATATAAATAATCGAATAAATAATTTTGAGATTGGACAAATACTCC CAATTAATCAAATACAAAATAAAA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U157617 | 1.6e-19 | 52 (11.0% of RFLP seq) | - |
SGN-U151876 | 1.2e-69 | 132 (27.8% of RFLP seq) | - |
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| ![]() Tomato-EXPIMP 2009 |
| ![]() Potato meta-QTL consensus map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG147 was used as an overgo probe on plate 10 [well D9]
Plausible BAC Matches: P057O11, P257I09, P212I01, P115N14, P019L13, P193L01, P204D06, P025M08, P115P16, P003P14, P034I10, P035F01, P239O16
Overgo Sequences
A sequence
TAGTCAAACCTGAGGCAGGAGATG
|
B sequence
TTCCTGCTACCTTGTGCATCTCCT
|
AB sequence
TAGTCAAACCTGAGGCAGGAGATGCACAAG
|
Marker sequence
TTATAGTTGCTCGGACTCTCCAAAACTGATGCCACACCTGTGCTGAATCC
TCCAAAATACACTGTTTTTGGAAGATCCGACATGAACCTGGCAACATTGC TAAAGAGTCTGAGCAACATAGACTATAAACACAACCACCATAGTCAAACC TGAGGCAGGAGATGCACAAGGTAGCAGGAAAATATTAAGTCAAAAATATC ATAAGGGGAGTACTGGGATATGTAGGCCACTGGTTGTAATTTACTATTTC TCGTTGTTAATAAGGTTGTGTGTCTGTATGTGTTCTCACCCAAACTTAAA GCTGAAATGACATTAATAGGCCTCAGAAACTGTTCTCTTGAGAGAAAACT AGCTGGTATTGATTGTTCCATTCAAAGTTCATGGATTTATTTGTTTGGTC CAAGATTCGTTCTTTCTCCATTCAACTTTTGCTATATATGAATCTCCAGA GTTGTTGCTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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