SGN Marker C2_At1g48160

SGN-M6820
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301391 (SGN)
120192 (CGN)
---
Capsicum annuumSingleSGN-U198426---
Lycopersicon CombinedSingleSGN-U225099---
Solanum tuberosumSingleSGN-U263863---
ArabidopsisSingleAt1g48160 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25228)
Chromosome
1
Position
17.79 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41095
Forward primer (5'-3')
TTGTGTGACGAAAGCTTGTGAAAAC
Accessions and product sizes
Solanum pennellii TA56
525
Solanum lycopersicum TA209
525
Approximate temperature
55°C
Reverse primer (5'-3')
TGCATGAAATCTCGTGGATATGCC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
525
Solanum pennellii TA56
300
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g48160  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6820 marker 6820
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