SGN Marker C2_At1g54500

SGN-M6871
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U205495---
Lycopersicon CombinedSingleSGN-U222559---
Solanum tuberosumSingleSGN-U247662---
ArabidopsisSingleAt1g54500 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38204)
Chromosome
1
Position
101.20 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

Map: Arabidopsis COSII   
Map version
44 (location: 25280)
Chromosome
1
Position
20.36 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

BLASTX result of original unigene sequences against Arabidopsis protein database

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Genomic location of C2_At1g54500  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6871 marker 6871
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