SGN Marker C2_At1g55900

SGN-M6889
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301838 (SGN)
121165 (CGN)
---
Lycopersicon CombinedSingleSGN-U222087---
Solanum tuberosumSingleSGN-U248399---
ArabidopsisSingleAt1g55900 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25299)
Chromosome
1
Position
20.91 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41116
Forward primer (5'-3')
TTTCCAAGTTGAATCGGGATCCCTC
Accessions and product sizes
Solanum pennellii TA56
525
Solanum lycopersicum TA209
525
Approximate temperature
55°C
Reverse primer (5'-3')
TCCTTGGTATGAAGCTAATACAGCTCG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
525
Solanum pennellii TA56
400
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g55900  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6889 marker 6889
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