SGN Marker SSR29
SGN-M702
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 55 High: 50
Repeat motif: AAG Repeat number: 7
Repeat motif: Repeat number:
Forward primer: AGTTGCTACACAGCAGCCAA
Reverse primer: AGCGATGAGACAAGAGGCAG
Predicted size: 156
Derivations |
This marker was derived from EST read SGN-E179977
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-LXCHM 2007 |
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR29 was used as an overgo probe on plate 9 [well B8]
Plausible BAC Matches: P101I08, P100H10
Overgo Sequences
A sequence
AACCGATCGTAGTTGCTACACAGC
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B sequence
TCTCGAGATGTTGGCTGCTGTGTA
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AB sequence
AACCGATCGTAGTTGCTACACAGCAGCCAA
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Marker sequence
GGGTCAAAAAAACCCCTTAAACTATCCAAAATAGCTCAAATTTACTCTTA
AACTATATTTCAAACTTAAAACTATCCTTTCTATCAAATTATTTGGTCAA AAATATCTTTGTTATTAAGGAAAGTTTTTTAATGTCATTTTGATGTCACA TGCCAAGTACAAATACATGGGCCTGGGAACAACGTTATGGGCCGGGTTGC TTCAAAATAACCGATCGTAGTTGCTACACAGCAGCCAACATCTCGAGACT TTTCTGGGTGATAGGAAATCTACGGAAAGAAGAAGAAGAAGAAGAAGAAA AGATGGCGGTAATGGGGAAATTGAGAATGTTCGTGGTTCAAGAACCAGTC GTGGCTGCCTCTTGTCTCATCGCTGGATTCGGTGATTCTTACTCTCTATC TTTACGCTATCATCAAATCTTCGATTTTATGTTTGTTGGTTAAAAATAAG TTGTTTTTTTTTCATTAGTGACAATTGAATTTTACACATAAGTTCACAAT TTTCGAACTGTATATCGGTGGGAATCAGGCGTCCATGGACCCTATTGTGG TTGAATCTATGAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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