SGN Marker C2_At1g76560

SGN-M7072
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302181 (SGN)
123791 (CGN)
---
Lycopersicon CombinedSingleSGN-U222288---
Solanum tuberosumSingleSGN-U262075---
ArabidopsisSingleAt1g76560 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25486)
Chromosome
1
Position
28.73 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

BLASTX result of original unigene sequences against Arabidopsis protein database

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Input file for PAUP, NEXUS format
Phylogenetic tree
Phylogenetic tree   |   [View]

Genomic location of C2_At1g76560  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7072 marker 7072
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