SGN Marker C2_At1g79840

SGN-M7118
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302775 (SGN)
122517 (CGN)
---
Solanum tuberosumSingleSGN-U251785---
ArabidopsisSingleAt1g79840 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38278)
Chromosome
3
Position
155.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41184
Forward primer (5'-3')
TGTCTCTCGCAACGTCCTATTTGA
Accessions and product sizes
Solanum pennellii TA56
250
Solanum lycopersicum TA209
250
Approximate temperature
55°C
Reverse primer (5'-3')
TCTGTCCTCTGGTCTAGAAGTGATAAC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25532)
Chromosome
1
Position
30.04 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g79840  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7118 marker 7118
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