SGN Marker SSR43
SGN-M716
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 42.857 High: 40
Repeat motif: TAC Repeat number: 7
Repeat motif: Repeat number:
Forward primer: CTCCAAATTGGGCAATAACA
Reverse primer: TTAGGAAGTTGCATTAGGCCA
Predicted size: 237
Derivations |
This marker was derived from EST read SGN-E95596
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Sun1642 x LA1589 |
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| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
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| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR43 was used as an overgo probe on plate 6 [well F11]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CGACAGCTTCATCACACATAGAGC
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B sequence
CAAGGCATCACAAAAGGCTCTATG
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AB sequence
CGACAGCTTCATCACACATAGAGCCTTTTG
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Marker sequence
TTCACGTTTACCATAATATCTGTACGAAATTCACCTGCGGAGAAAGAGGA
TTACACGGTGGGAATCGAACCCCACCCACAAAATCTTCAAGAGTAACCAA CTAACCGAACAACTAAAATTCTCCTTTTTCTTTTTTTTAGCTTGAGTTTG TGTACTACTATTAGGAATTTAATTTATACATATTAACGCCTTGCACTTTC CTTCTTTCTTGCTATCATATATATACATATTTCTTATATTGTCAGTATAT ATAACTGTTTACCCTCGTATATATTCTTTTTTGTCGTGTTTACACAGGCG CGACAGCTTCATCACACATAGAGCCTTTTGTGATGCCTTGGTTCAAGAAA ATGCAAGAAATATCCTTTCACCAAACTCCTTGATGAACACCCTTGGCATG AACAACAACCAATATTTATATGGAAGTAGTAGCAACATAAACTTAGGCAC CTTCTCCAAATTGGGCAATAACAACAACATCACAAAGACTACTACTACTA CTACAACTACTACTAGTGGTGTTCAATTTGATCATCATCATCATGACAAC AACCTCATTGGATCAAGTACTACTACTACTACTACTACTAACAATCCCTT TTTCCTTCAAGATACAAATCAAGATCATTACAATGCCAACAACAACAATA TCAAACCATTAATGGTCCATGGCCTAATGCAACTTCCTAATCTTGATCAT AACAACAACAATAGTAGTAGTAGTACTACTATGTTTAACCCTAACTTTTT TCAAAACAATTTGTCTACCAATAGTGGAAATTTTGGG |
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