SGN Marker C2_At2g20690

SGN-M7250
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301762 (SGN)
122246 (CGN)
---
Capsicum annuumMultipleSGN-U205289---
Lycopersicon CombinedSingleSGN-U220728---
Solanum tuberosumSingleSGN-U248666---
ArabidopsisSingleAt2g20690 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38312)
Chromosome
7
Position
42.20 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39574
Forward primer (5'-3')
TCCTTCAAAGCCCTCAAACCCTTC
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
AGATTAACCTTCTGCCCCACTTTC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25665)
Chromosome
2
Position
8.93 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA
Forward amplicon sequence for S. betaceum 6002061 plant #4, AB1 chromatogram - [View]
Forward amplicon sequence for S. betaceum 6002061 plant #4, plain text
Forward amplicon sequence for S. uniloba 6002078 plant #6, AB1 chromatogram - [View]
Forward amplicon sequence for S. uniloba 6002078 plant #6, plain text

Genomic location of C2_At2g20690  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7250 marker 7250
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