SGN Marker C2_At2g24490

SGN-M7285
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle309740 (SGN)
126539 (CGN)
---
Capsicum annuumSingleSGN-U203842---
ArabidopsisSingleAt2g24490 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25701)
Chromosome
2
Position
10.41 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41230
Forward primer (5'-3')
TGATGCCGTGGATTCCAAGGAAG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
ACCACGAGGTGTATTTTGCCCTG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  
Other PCR data 
PCR data   Exp. ID 10652
Forward primer (5'-3')
TGATGCCGTGGATTCCAAGGAAG
 
 
Mg+2 concentration
1.5mM
Reverse primer (5'-3')
ACCACGAGGTGTATTTTGCCCTG
Enzymes
  
Accessions and product sizes
Solanum lycopersicum LA925: 180
Approximate temperature
55°C
  
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Genomic location of C2_At2g24490  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7285 marker 7285
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