SGN Marker C2_At2g33855

SGN-M7394
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311398 (SGN)
126651 (CGN)
---
Solanum tuberosumSingleSGN-U253077---
ArabidopsisSingleAt2g33855 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38355)
Chromosome
2
Position
58.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39608
Forward primer (5'-3')
AACAACATCATACTTAATCCCACAAC
Accessions and product sizes
Solanum lycopersicum TA209
1600
Solanum pennellii TA56
1600
Approximate temperature
55°C
Reverse primer (5'-3')
ATCTCCCCATTTAGCTTCCTCCACTC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
1600
Solanum lycopersicum TA209
1500
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25811)
Chromosome
2
Position
14.33 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At2g33855  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7394 marker 7394
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