SGN Marker SSR67
SGN-M740
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 60 High: 50
Repeat motif: AGA Repeat number: 2
Repeat motif: AAG Repeat number: 7
Repeat motif: Repeat number:
Forward primer: GCACGAGACCAAGCAGATTA
Reverse primer: GGGCCTTTCCTCCAGTAGAC
Predicted size: 100
Derivations |
This marker was derived from EST read SGN-E50834
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR67 was used as an overgo probe on plate 9 [well H7]
Plausible BAC Matches: P076E04, P323A08, P026G04, P318G08, P299H14, P303J16, P141B16, P105F09, P301I13, P290B11, P143B24, P260G05, P012D01, P275E03, P263D01, P290P06, P323C14, P270O24, P046H01, P249E06, P001N07
Overgo Sequences
A sequence
AGATGGCTCGTACCAAGCAAACTG
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B sequence
CCAGTAGACTTACGAGCAGTTTGC
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AB sequence
AGATGGCTCGTACCAAGCAAACTGCTCGTA
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Marker sequence
GCACGAGACCAAGCAGATTAAGAAGAAGAAGAAGAAGAAGAGAAGAAAAA
GATGGCTCGTACCAAGCAAACTGCTCGTAAGTCTACTGGAGGAAAGGCCC CTAGGAAGCAACTTGCTACCAAGGCTGCTCGTAAGTCTGCTCCTACTACA GGTGGAGTGAAGAAGCCTCACAGATACCGCCCTGGTACTGTTGCTCTTCG TGAAATCCGTAAGTACCAGAAGAGTACTGAGCTCTTGATCAGGAAGCTTC CCTTCCAGAGGCTTGTTCGTGAAATTGCCCAGGACTTCAAGACTGATCTG CGTTTCCAGAGTCATGCTGTGTTGGCTCTTCAAGAGGCTGCTGAGGCCTA CTTGGTTGGTCTGTTTGAGGACACCAATCTTTGTGCCATTCATGCCAAGC GTGTGACCATTATGCCCAAGGACATTCAGCTTGCTAGGCGTATTANGGGC GAGCGTGCTTAAGTTGATCAACCATGGCAGTTCTATTGTTGCTCTTTTTA GATTTTTCTTTTTGTGAAGACTTAAAAAGTTGGTAATGAAATCTAATAGT AGGGATAATGTCGTATGTTGATGCTTA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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