SGN Marker SSR68

SGN-M741

SynonymsNone
Locus associationsNone
SSR info 

Annealing temperatures: Low: 45 High: 55
Repeat motif: CAA   Repeat number: 7
Repeat motif:    Repeat number:
Forward primer: AGCAGAGGCAGTAAGGTGTG
Reverse primer: CCGATTCACTCGGAAACATT
Predicted size: 146
Derivations 
This marker was derived from EST read SGN-E50342
Mapped locations  
Map: Sun1642 x LA1589   
Map version
85 (location: 43819)
Chromosome
9
Position
17.90 cM
Confidence
uncalculated
Protocol
SSR


Sun1642 x LA1589

PCR data   Exp. ID 44838
Forward primer (5'-3')
AGCAGAGGCAGTAAGGTGTG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
CCGATTCACTCGGAAACATT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589   
Map version
79 (location: 43279)
Chromosome
9
Position
30.90 cM
Confidence
uncalculated
Protocol
SSR


Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

PCR data   Exp. ID 44652
Forward primer (5'-3')
AGCAGAGGCAGTAAGGTGTG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
CCGATTCACTCGGAAACATT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  
Other PCR data 
PCR data   Exp. ID 32065
Forward primer (5'-3')
AGCAGAGGCAGTAAGGTGTG
 
 
Mg+2 concentration
Unknown
Reverse primer (5'-3')
CCGATTCACTCGGAAACATT
Enzymes
  
Accessions and product sizes
Approximate temperature
55°C
  
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of SSR68  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D741 marker 741
User comments 
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