SGN Marker C2_At2g45200

SGN-M7525
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U198115---
Lycopersicon CombinedMultipleSGN-U238536---
Solanum tuberosumSingleSGN-U251665---
ArabidopsisSingleAt2g45200 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38392)
Chromosome
1
Position
55.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39640
Forward primer (5'-3')
TCTAAGGATCTGAGTATGGAGATACTGC
Accessions and product sizes
Solanum lycopersicum TA209
1600
Solanum pennellii TA56
1600
Approximate temperature
55°C
Reverse primer (5'-3')
ATCCTAAAGTTGGGGAACCAGCTTCT
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
600
Solanum pennellii TA56
700
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25949)
Chromosome
2
Position
18.65 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At2g45200  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7525 marker 7525
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