SGN Marker SSR85
SGN-M758
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 45 High: 50
Repeat motif: TAA Repeat number: 7
Repeat motif: Repeat number:
Forward primer: ATCCGTTAGCTATTGTGCCG
Reverse primer: TTGCCATGCACTTATCTTCG
Predicted size: 179
| Derivations |
This marker was derived from EST read SGN-E62108
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
| Other PCR data |
| ||||||||||||||
| Overgo hybridization and physical mapping |
SSR85 was used as an overgo probe on plate 16 [well F1]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
GCGCCGATAGAAGAAACAAATCCG
|
|
B sequence
CCGGCACAATAGCTAACGGATTTG
|
|
AB sequence
GCGCCGATAGAAGAAACAAATCCGTTAGCT
|
|
Marker sequence
TTATCAAACACCTCATACCCTAGTAAACACTACTACCACCAGCACCAATT
ACAACACCAACACTACAACAGAAAATCATCAAGAAGATGAACAACAAATC AGAGATATACATGCTTTAACCCCACCAAGACCTCCATCAAATAGTGGCCG TCGAATCGAAACTTGGGAAACAAGTAGCCATAGATCATCATCAATTTCCG AAGTAGCATCTAGTGAGAATTTCTCTACTATGAGCCGGGAGTTCAGCGCC CTCGTTCTCGCGGGATCGTCAGTTAGCAACAATCCCGCTAGCGAGAACGA GGTGAATAATCATATATATAATAACAACAATTATAATAGCAATAATTTGG GGAGCATCGGCGAAGAAGAAAATGATGCGCCGATAGAAGAAACAAATCCG TTAGCTATTGTGCCGGATAATTATAGTAATACTTTAGATCCGATTATTGT TAATCCTTCAAGAAGGATTAATAATAATAATAATAATAATGTTTTGAGAA ATAATATTGGAGAAGTAAGTAGTGTTCAAAGAGTGAAAAAAGAAGAAATT GAATCGAAGATAAGTGCATGGCAAAATGCTAAAATTTCGAAGATTAATAA TAGGTTTAAACGTGAAGATGCTGTTATTAATGGATGGGAAAGGGAAGAAG TACAAAAAGCTACTTCTTGGATG |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of SSR85
|
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
