SGN Marker C2_At3g05510

SGN-M7625
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U199549---
Lycopersicon CombinedSingleSGN-U239728---
Solanum tuberosumSingleSGN-U262632---
ArabidopsisSingleAt3g05510 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38428)
Chromosome
1
Position
114.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39673
Forward primer (5'-3')
ATTTCCGTAGAGATACTCTGCCTTCTTC
Accessions and product sizes
Solanum pennellii TA56
750
Solanum lycopersicum TA209
750
Approximate temperature
55°C
Reverse primer (5'-3')
ATCTGCTTCTGGATCAATATCCTTGC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
750
Solanum pennellii TA56
525
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26050)
Chromosome
3
Position
1.60 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g05510  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7625 marker 7625
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