SGN Marker SSR95

SGN-M768

SynonymsNone
Locus associationsNone
SSR info 

Annealing temperatures: Low: 43.478 High: 45
Repeat motif: TA   Repeat number: 13
Repeat motif:    Repeat number:
Forward primer: CAATCCAACAAGCAATCCCT
Reverse primer: CCACATAACTAAGCCCACAACTT
Predicted size: 224
Derivations 
This marker was derived from EST read SGN-E109615
Mapped locations  
Map: Sun1642 x LA1589   
Map version
85 (location: 43824)
Chromosome
1
Position
36.00 cM
Confidence
uncalculated
Protocol
SSR


Sun1642 x LA1589

PCR data   Exp. ID 44846
Forward primer (5'-3')
CAATCCAACAAGCAATCCCT
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
CCACATAACTAAGCCCACAACTT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589   
Map version
79 (location: 43284)
Chromosome
1
Position
43.10 cM
Confidence
uncalculated
Protocol
SSR


Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

PCR data   Exp. ID 44660
Forward primer (5'-3')
CAATCCAACAAGCAATCCCT
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
CCACATAACTAAGCCCACAACTT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  
Other PCR data 
PCR data   Exp. ID 32024
Forward primer (5'-3')
CAATCCAACAAGCAATCCCT
 
 
Mg+2 concentration
Unknown
Reverse primer (5'-3')
CCACATAACTAAGCCCACAACTT
Enzymes
  
Accessions and product sizes
Approximate temperature
45°C
  
Genomic location of SSR95  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D768 marker 768
User comments 
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