SGN Marker C2_At3g11530

SGN-M7700
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle303614 (SGN)
121526 (CGN)
---
Lycopersicon CombinedSingleSGN-U242905---
ArabidopsisSingleAt3g11530 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26127)
Chromosome
3
Position
3.63 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41364
Forward primer (5'-3')
ATTGGTGGCCAATGTTATCAGCTC
Accessions and product sizes
Solanum pennellii TA56
1200
Solanum lycopersicum TA209
1200
Approximate temperature
55°C
Reverse primer (5'-3')
TTCCCACAGCTGATGCCCCTG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
175+200+650
Solanum pennellii TA56
200+325
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g11530  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7700 marker 7700
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