SGN Marker C2_At3g12640

SGN-M7719
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U203487---
Lycopersicon CombinedSingleSGN-U237192---
ArabidopsisSingleAt3g12640 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26146)
Chromosome
3
Position
4.02 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41375
Forward primer (5'-3')
ATGGGGAGTGGAGATAGAGAAGATG
Accessions and product sizes
Solanum pennellii TA56
1300
Solanum lycopersicum TA209
1300
Approximate temperature
55°C
Reverse primer (5'-3')
ACGCCACCATTTTTGAACAAGACTATG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
1300
Solanum pennellii TA56
1000
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g12640  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7719 marker 7719
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