SGN Marker C2_At3g12920

SGN-M7722
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301882 (SGN)
121871 (CGN)
---
Capsicum annuumSingleSGN-U204798---
Lycopersicon CombinedMultipleSGN-U220841---
Solanum tuberosumSingleSGN-U247241---
ArabidopsisSingleAt3g12920 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26149)
Chromosome
3
Position
4.12 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41376
Forward primer (5'-3')
TTTGTCGGTGATGATGTTTTGCC
Accessions and product sizes
Solanum pennellii TA56
1100
Solanum lycopersicum TA209
1100
Approximate temperature
55°C
Reverse primer (5'-3')
TGTGGCTTCGTTGGTTTGTGC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
200+800
Solanum pennellii TA56
100+300+700
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g12920  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7722 marker 7722
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