SGN Marker SSR104
SGN-M777
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 55 High: 40
Repeat motif: AT Repeat number: 11
Repeat motif: Repeat number:
Forward primer: TTCCATTTGAATTCCAACCC
Reverse primer: CCCACTGCACATCAACTGAC
Predicted size: 249
| Derivations |
This marker was derived from EST read SGN-E170841
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Other PCR data |
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| Overgo hybridization and physical mapping |
SSR104 was used as an overgo probe on plate 10 [well G8]
Plausible BAC Matches: P128B04, P024J22, P111G23, P069G12, P155C04, P041K15
Overgo Sequences
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A sequence
CTTATGCATCCACGTGGAGCAAAC
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B sequence
AGGAGCATCTCACACTGTTTGCTC
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AB sequence
CTTATGCATCCACGTGGAGCAAACAGTGTG
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Marker sequence
GGAGATGTAAGAAAAATATCCAAAAACCAATCTTTTGAAATCTTGAATTT
ACCCAATTTCTGTCGGAATTTTCGCTCAGATTTCCATTTGAATTCCAACC CATTTTCAGATAATCTCAAGTACCCTTCACTGTATTTTTTTTTTTCGTGT GTGGGGATATATATATATATATATATATTATAATAGAGGGGTACCCTATC TTCCAGATTTGTTCATTGACTGGAAGAATAAATTTACCTCACAGATCGGC AGAAATTAGCTCTTCTAACTCAGACGACTCGACATTCAAACAGATTGAAA GATATGCAGAGTCAGTTGATGTGCAGTGGGTGCAGGACAATGCTTCTTTA TCCCAGAGGAGCTTCTAATGTCTGCTGTGCAGTGTGCAATGCACTCACCC CTGTCCCACCACCTGGAATGGAAATGGCTCAATTGATATGTGGAGGCTGT CGTACATTACTTATGCATCCACGTGGAGCAAACAGTGTGAGATGCTCCTG CTGTCATACGGTGAACCTTGTCCCAGGTCCAAACCAGTTTGCTCATGTCT ACTGCGGGAACTGCCGTATGATGCTGATGTATCCATGTGGAGCTCCATTC GGTTAATGTGCAGTATGCCATTATATTACCAATGTTAAT |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of SSR104
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| User comments |
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