SGN Marker C2_At3g17970

SGN-M7782
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U203114---
Lycopersicon CombinedMultipleSGN-U217239---
Solanum tuberosumSingleSGN-U248015---
ArabidopsisSingleAt3g17970 on TAIR---
Mapped locations  
Map: Tobacco N. tomentosiformis   
Map version
91 (location: 46672)
Chromosome
3
Position
56.00 cM
Confidence
F(LOD3)
Protocol
CAPS


Tobacco N. tomentosiformis

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38481)
Chromosome
3
Position
140.50 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41402
Forward primer (5'-3')
TCAGCAAATGTATGGGTTTTGTTGGG
Accessions and product sizes
Solanum lycopersicum TA209
600
Solanum pennellii TA56
600
Approximate temperature
55°C
Reverse primer (5'-3')
AGCAGGTTCATGAGTCCTTGACCAGTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
350
Solanum pennellii TA56
325
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26212)
Chromosome
3
Position
6.15 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At3g17970  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7782 marker 7782
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)