SGN Marker SSR108
SGN-M781
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 45 High: 45
Repeat motif: TC Repeat number: 6
Repeat motif: ACTCTC Repeat number: 2
Repeat motif: Repeat number:
Forward primer: TGTGTTGGATGTTTGGCACT
Reverse primer: GCCATTGAAACTTGCAGAGA
Predicted size: 217
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR108 was used as an overgo probe on plate 1 [well A7]
Plausible BAC Matches: P195G07, P221K17, P226P17, P258H12, P131C07, P173F03, P024K09, P196N03, P170I24, P172F14, P170F21
Overgo Sequences
A sequence
TCCATCTCTTTGTGGGGACATTTC
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B sequence
CAGAGAGAGAAATAGAGAAATGTC
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AB sequence
TCCATCTCTTTGTGGGGACATTTCTCTATT
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Marker sequence
TTAGTACAATTTTCATGAAGAATTGAAAATTGTATATATAAGTATTTGAG
AAGAAAAAAAAGTCTCTTTGAATTATGTTGTTAGAGTTGTGTTGGATGTT TGGCACTTAATTTTAGATTTGCCAAACACTACATTTCTACTTTATTTCCC TTTTTTCTTTGTGTGTGTTGGTGTTTTTGTAATTTTTACTATGCTAATGA TTTAAGCATCTAAAAAAAAAAAAAAAAAACTCTCACTCTCTCTCTCTCTC TCCATCTCTTTGTGGGGACATTTCTCTATTTCTCTCTCTGCAAGTTTCAA TGGCTACTGAATTTGTCAACAAGATTCATCCTGAATACCCTCACATGATT TATGAAGCCCTTGATGCATTGCAACAAAAAGAAGGCTCAAACAAGTCATC AATATCAAAGTACATTGAATCTAAGTATGGAAACATGAATGATGCACACT CAAAGTTGATAACTTACCATTTGGATAGAATGAAACAAACTGGTGAACTT ATTTTCCTAAAAAACAACTACCTTAAACCTGGTCCAGATGCACCCCCTAA GCGTGGCCGCGGCCGACCACCTAAACCCAAACCTTTATTGCCACAAGG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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