SGN Marker C2_At3g48120

SGN-M7945
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle310619 (SGN)
131230 (CGN)
---
Capsicum annuumSingleSGN-U197744---
Lycopersicon CombinedMultipleSGN-U230091---
Solanum tuberosumSingleSGN-U268030---
ArabidopsisSingleAt3g48120 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38536)
Chromosome
12
Position
59.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39755
Forward primer (5'-3')
ACAAATTGAGGCTGCTCATGATGAGG
Accessions and product sizes
Solanum lycopersicum TA209
1250
Solanum pennellii TA56
1250
Approximate temperature
58°C
Reverse primer (5'-3')
ACGCACACGATCACGCCAAGAAC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
800
Solanum lycopersicum TA209
750
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26379)
Chromosome
3
Position
17.78 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g48120  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7945 marker 7945
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