SGN Marker C2_At3g55010

SGN-M8039
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeMultiple301864 (SGN)
124805 (CGN)
---
Capsicum annuumSingleSGN-U197032---
Lycopersicon CombinedSingleSGN-U231556---
Solanum tuberosumSingleSGN-U245495---
ArabidopsisSingleAt3g55010 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38571)
Chromosome
4
Position
64.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

Map: Arabidopsis COSII   
Map version
44 (location: 26475)
Chromosome
3
Position
20.40 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

BLASTX result of original unigene sequences against Arabidopsis protein database

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Input file for PAUP, NEXUS format
Phylogenetic tree
Phylogenetic tree   |   [View]

Genomic location of C2_At3g55010  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8039 marker 8039
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)