SGN Marker C2_At3g57270

SGN-M8071
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeMultiple300070 (SGN)
119618 (CGN)		---
Capsicum annuumMultipleSGN-U197257---
Lycopersicon CombinedSingleSGN-U214527---
Solanum tuberosumSingleSGN-U246296---
ArabidopsisSingleAt3g57270 on TAIR---
Mapped locations  
Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 49260)
Chromosome
10
Position
60.66 MB
Confidence
uncalculated
Protocol
CAPS


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 47196)
Chromosome
10
Position
50.50 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Eggplant-COSII   
Map version
63 (location: 42231)
Chromosome
10
Position
122.70 cM
Confidence
F(LOD3)
Protocol
CAPS


Eggplant-COSII

PCR data   Exp. ID 43797
Forward primer (5'-3')
AGAATGAGAATCTATGATCCTCATCAACC
Accessions and product sizes
Approximate temperature
58°C
Reverse primer (5'-3')
TGTTTGGTGTAAACAGTCCAAAATG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Pepper-COSII   
Map version
58 (location: 41452)
Chromosome
10
Position
119.10 cM
Confidence
F(LOD3)
Protocol
CAPS


Pepper-COSII

PCR data   Exp. ID 43428
Forward primer (5'-3')
AGAATGAGAATCTATGATCCTCATCAACC
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
TGTTTGGTGTAAACAGTCCAAAATG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38580)
Chromosome
10
Position
53.00 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39776
Forward primer (5'-3')
AGAATGAGAATCTATGATCCTCATCAACC
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
TGTTTGGTGTAAACAGTCCAAAATG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26507)
Chromosome
3
Position
21.20 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At3g57270  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8071 marker 8071
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