SGN Marker C2_At4g01040

SGN-M8144
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U199968---
Lycopersicon CombinedSingleSGN-U218948---
Solanum tuberosumSingleSGN-U265618---
ArabidopsisSingleAt4g01040 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26581)
Chromosome
4
Position
0.45 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41528
Forward primer (5'-3')
TATGACCTGGCAAAGAAGTTCAGTTC
Accessions and product sizes
Solanum pennellii TA56
700
Solanum lycopersicum TA209
700
Approximate temperature
55°C
Reverse primer (5'-3')
TAAGCTTCTTCTTCTTCAGCAAGTCC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
450
Solanum lycopersicum TA209
700
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At4g01040  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8144 marker 8144
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