SGN Marker C2_At4g28290

SGN-M8390
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311236 (SGN)
128439 (CGN)
---
Lycopersicon CombinedSingleSGN-U221074---
Solanum tuberosumSingleSGN-U252987---
ArabidopsisSingleAt4g28290 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38681)
Chromosome
10
Position
19.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39858
Forward primer (5'-3')
AGAAATCAAATATTTTTGCAGCTTCC
Accessions and product sizes
Solanum pennellii TA56
450
Solanum lycopersicum TA209
450
Approximate temperature
55°C
Reverse primer (5'-3')
TCAAATTTTGGTGCAAATTTGTCTGAAG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
490
Solanum pennellii TA56
480
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26831)
Chromosome
4
Position
14.01 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At4g28290  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8390 marker 8390
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