SGN Marker C2_At5g03460

SGN-M8561
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U197582---
Lycopersicon CombinedSingleSGN-U217681---
Solanum tuberosumSingleSGN-U245462---
ArabidopsisSingleAt5g03460 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27010)
Chromosome
5
Position
0.86 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41661
Forward primer (5'-3')
AGAAAGCGCACCTCCTGCTTGTCC
Accessions and product sizes
Solanum pennellii TA56
500
Solanum lycopersicum TA209
500
Approximate temperature
55°C
Reverse primer (5'-3')
TCCAACTGCCTTAGGTACAGGATGG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
250
Solanum lycopersicum TA209
500
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g03460  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8561 marker 8561
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