SGN Marker C2_At5g03900

SGN-M8564
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302876 (SGN)
124227 (CGN)
---
Lycopersicon CombinedSingleSGN-U224962---
ArabidopsisSingleAt5g03900 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27013)
Chromosome
5
Position
1.05 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41663
Forward primer (5'-3')
TGGCTCATTTTTCACCATTCCTTTG
Accessions and product sizes
Solanum lycopersicum TA209
1000
Solanum pennellii TA56
1000
Approximate temperature
60°C
Reverse primer (5'-3')
TCTGTGCCATATCCCGGGCACTCA
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
425
Solanum pennellii TA56
375
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g03900  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8564 marker 8564
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