SGN Marker C2_At5g08050

SGN-M8612
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201731---
Lycopersicon CombinedMultipleSGN-U217198---
Solanum tuberosumSingleSGN-U248820---
ArabidopsisSingleAt5g08050 on TAIR---
Mapped locations  
Map: Eggplant-COSII   
Map version
63 (location: 42247)
Chromosome
3
Position
120.00 cM
Confidence
F(LOD3)
Protocol
CAPS


Eggplant-COSII

PCR data   Exp. ID 43814
Forward primer (5'-3')
TGCGATTTCACGTTTCTCTGCTTC
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
TCCCCTACTGGAAATACAGTTGTTG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38760)
Chromosome
3
Position
104.00 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41684
Forward primer (5'-3')
TGCGATTTCACGTTTCTCTGCTTC
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
TCCCCTACTGGAAATACAGTTGTTG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27066)
Chromosome
5
Position
2.58 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g08050  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8612 marker 8612
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